TimeTP

Influence maximization in time bounded network
identifies transcription factors regulating perturbed pathways


Three main features of TimeTP

  • Delay analysis by Cross-correlation to locate perturbed subpathways and to construct time bounded network
  • Labeled influence maximization to find transcription factors that trigger the pathway perturbation.
  • TF-Pathway map in time clock to visualize path from TF to perturbed subpathway with expression propagation along time.
  • TimeTP News

  • 2016/07/27 : TimeTP-web released
  • 2016/07/02 : TimeTP ver 1.0. bug fixes
  • 2016/06/28 : TimeTP ver 1.0. bug fixes
  • 2016/06/15 : TimeTP ver 1.0. released
  • Publication

    Influence maximization in time bounded network identifies transcription factors regulating perturbed pathways. Kyuri Jo; Inuk Jung; Ji Hwan Moon; Sun Kim. Bioinformatics 2016 32 (12): i128-i136 doi: 10.1093/bioinformatics/btw275