piClust Web Service

Find piRNA clusters and transcripts from small RNA-seq data!

  • Input parameters
    • Eps, Minreads and cutscore (default: 5000, 8, 1)
    • If input parameters are unkown, perform an analysis by clicking on "Set Parameters"
  • Input file
    • Required to be a SAM formatted alignment file. The alignment file should not allow more than 5 multiple mapping sites for a read. File size limited to 200MB.
    • sample file (human hg19)
  • Select the genome related to the alignment file
  • Run piClust by clicking "Run piClust"
  • Please be patient after running piClust and do not refresh page.